Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891510.1_cds_XP_016446299.1_41170
CDS Infomation

[gene=LOC107771453] [db_xref=GeneID:107771453] [protein=tetracycline resistance protein, class B-like] [protein_id=XP_016446299.1] [location=join(11950..12255,12852..13603,13826..14225)] [gbkey=CDS]
Sequence

ATGGTAAAGCTCAAGAACTTGAGATCAGATACATTGACACTTGTACTTGTAAATATTGCT
GGTATAATGGAGAAAGCTGATGAGTCTTTATTACCTGGAGCTTACAAAGAAGTTGGCAAA
GAATTGCACACTGATCCCACTGGTCTTGGCTCTCTCACTGTATTTAGATCATTAGTTCAA
TGCCTTTGTTATCCTTTAGCTGCATACTTAGCTGCTCGTCATAACAGAGCTCATGTCATA
GCTCTTGGCGCTTTTCTCTGGTCTGCTGCTACTTTCCTTGTTGCTATCTCCTCCACCTTC
ACGGAGGTAGCAATTGCCAGAGGATTGAATGGAGTAGGACTTGCAATAGTCATACCAGCA
ATCCAATCTCTAGTTGCTGATTCAACTGATGATAGAAATCGCGGTACAGCCTTTGGATGG
TTAGCACTAACATCAAATTTTGGCTCAATTCTTGGTGGGATTTTGGCTGTGCTAATAGCA
GAAACATCATTCTTGGGAATCCCTGGCTGGAGAATTTCCTTCCATTTGGTTGGTTTTATA
AGTGTTATCGTTGGTTTTTTAGTCCATCTCTTTGCCAATGATCCGCGATTCCTTGACAAT
AAGGGCAACGCAAAAGATCAACTTGCACCGAAACCATTTCAAGAAGAAGTCATCGAACTC
CTAAAAGAAGCGAAAGCAGTTATCAAAATACCTTCCTTCCAAATAATTATTGCACAAGGG
GTTTCCGGGACATTCCCTTGGTCATCGTTGTCGTTTGTTACTATGTGGTTAGAGCTTATA
GGCTTCTCCCATAAGACAACAGCACTACTCTGGACTTTGTTTCAAGTTTCTGTGTCGCTT
GGCGCGTTGTTTGGGGGCCGCATGGGGGATGTCTTGGCCAAGCACTTTCCTAATTCTGGT
AGAATTATTCTAGCTCAGATTAGCTCTGGCTCAGGAATTCCTTTAGCTGCAATTCTACTG
TTGCTATTGCCTAATGATCCTAAAACAGCTATGTTGCATGGTTTAGTCTTAATCATCACG
GGATTAATCATATCATGGTGTGGTTCAGCAACAAACAATCCAATATTTGCTGAGATAGTC
CCTGAGAGAGCTCGGACAAGCATTTACGCTCTGGATCGATCTTTTGAGACGATAATTGCA
TCCTTTGCGCCACTGGTGGTTGGTATTTTAGCTCAACAAATTTTTGGTTATAAACCAATT
CCAAAGGGATCAACAAAGTCTCAAGAAACTGAAACAGATAGACAGAATGCTGCATCACTT
GCCAAGGCACTATGCACTGCAGTAGGCATTCCATCGGCCATTTGTTGCTTCATATATTCC
TTCCTCTATTGCACATATCCACAAGATAGGGATCGTGCCCGGTTGCAACAGATTGATGAA
ACATGCAAGTTTCCATCTGAAGAACAACAAGCCTTACTTGAGAGCGATGAGCACAGACCT
CTTTCAGCAATTTGTTGA

Peptide Sequence

PEP ID

XP_016446299.1
PEP Infomation

PREDICTED: tetracycline resistance protein, class B-like [Nicotiana tabacum]
Sequence

MVKLKNLRSDTLTLVLVNIAGIMEKADESLLPGAYKEVGKELHTDPTGLGSLTVFRSLVQ
CLCYPLAAYLAARHNRAHVIALGAFLWSAATFLVAISSTFTEVAIARGLNGVGLAIVIPA
IQSLVADSTDDRNRGTAFGWLALTSNFGSILGGILAVLIAETSFLGIPGWRISFHLVGFI
SVIVGFLVHLFANDPRFLDNKGNAKDQLAPKPFQEEVIELLKEAKAVIKIPSFQIIIAQG
VSGTFPWSSLSFVTMWLELIGFSHKTTALLWTLFQVSVSLGALFGGRMGDVLAKHFPNSG
RIILAQISSGSGIPLAAILLLLLPNDPKTAMLHGLVLIITGLIISWCGSATNNPIFAEIV
PERARTSIYALDRSFETIIASFAPLVVGILAQQIFGYKPIPKGSTKSQETETDRQNAASL
AKALCTAVGIPSAICCFIYSFLYCTYPQDRDRARLQQIDETCKFPSEEQQALLESDEHRP
LSAIC

Transcript Sequence

Gene sequence data has not been registered.